Table 4 Length 300 simulation Robinson-Foulds distances
| Â | Molecular Clock | No Molecular Clock | ||||||
|---|---|---|---|---|---|---|---|---|
| Â | AA | BB | AB | AVG | CC | DD | CD | AVG |
M=0.1 BSI-JC | 4.9 | 4.8 | 4.9 | 4.9 | 4.4 | 4.5 | 4.3 | 4.4 |
M=0.1 K2P | 5.1 | 4.9 | 5.0 | 5.0 | 4.7 | 4.7 | 4.4 | 4.6 |
M=0.1 ML | 4.3 | 3.8 | 4.1 | 4.1 | 3.6 | 3.7 | 3.6 | 3.6 |
M=0.3 BSI-JC | 3.2 | 2.6 | 3.3 | 3.0 | 2.1 | 2.1 | 2.1 | 2.1 |
M=0.3 K2P | 4.4 | 3.3 | 4.0 | 3.9 | 2.7 | 2.6 | 2.7 | 2.7 |
M=0.3 ML | 3.1 | 2.2 | 2.9 | 2.7 | 1.8 | 1.7 | 1.8 | 1.8 |
M=1.0 BSI-JC | 4.8 | 4.8 | 5.3 | 5.0 | 3.1 | 2.8 | 2.9 | 2.9 |
M=1.0 K2P | 5.9 | 5.7 | 6.1 | 5.9 | 5.9 | 5.5 | 5.7 | 5.7 |
M=1.0 ML | 4.3 | 3.6 | 4.1 | 4.0 | 1.9 | 1.7 | 1.8 | 1.8 |
M=2.0 BSI-JC | 9.1 | 11.6 | 10.3 | 10.3 | 11 | 11.4 | 11.2 | 11.2 |
M=2.0 K2P | 8.8 | 11.7 | 9.9 | 10.1 | 15.1 | 15.0 | 14.9 | 15.0 |
M=2.0 ML | 6.6 | 6.5 | 6.6 | 6.6 | 4.3 | 4.1 | 4.2 | 4.2 |