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Table 9 BSI-JC accuracy based on number of orderings

From: Invariant based quartet puzzling

Tree

k=1000

k=500

k=100

k=50

k=10

CC M=0.1

11

10

11

11

10

CC M=0.3

33

33

34

32

27

CC M=1.0

20

19

18

18

14

CC M=2.0

0

0

0

0

0

CD M=0.1

12

13

13

12

11

CD M=0.3

36

33

34

33

27

CD M=1.0

21

22

20

19

14

CD M=2.0

0

0

0

0

0

DD M=0.1

10

10

10

10

9

DD M=0.3

34

34

34

33

28

DD M=1.0

23

24

22

22

18

DD M=2.0

0

0

0

0

0

  1. Percentage of reconstructed trees that match the correct tree using N randomly generated orderings (length=300 bp).
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Algorithms for Molecular Biology

ISSN: 1748-7188