Figure 2
Distributions of AUC values for two edgeR -related combinations. Simulation results for 100 trials under PA = (a) 50%, (b) 70%, and (c) 90%, with PDEG = 20%. Left panel: box plots for AUC values. Right panel: scatter plots for AUC values. When the performances between the two combinations are completely the same, all the points should be on the black (y = x) line. Point below (or above) the black line indicates that the AUC value from the edgeR/TbT combination is higher (or lower) than that from the edgeR/default combination.