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Table 10 Prokaryotic ChIP data: mean error in motif width

From: MCOIN: a novel heuristic for determining transcription factor binding site motif width

Conservation MCOIN (w∗ ± 4) E-values (w∗ ± 4)
(mean bits/col) MAE RMSE MAE RMSE
0.99 1.44 1.86 2.33 2.73
  1. Mean absolute error (MAE) and root mean squared error (RMSE) for 9 datasets created using real prokaryotic data determined through ChIP experiments. The datasets used are summarised in Table 2.
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Algorithms for Molecular Biology

ISSN: 1748-7188