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Table 10 Prokaryotic ChIP data: mean error in motif width

From: MCOIN: a novel heuristic for determining transcription factor binding site motif width

Conservation

MCOIN (w∗ ± 4)

E-values (w∗ ± 4)

(mean bits/col)

MAE

RMSE

MAE

RMSE

0.99

1.44

1.86

2.33

2.73

  1. Mean absolute error (MAE) and root mean squared error (RMSE) for 9 datasets created using real prokaryotic data determined through ChIP experiments. The datasets used are summarised in Table 2.
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Algorithms for Molecular Biology

ISSN: 1748-7188