Table 5 Realistic synthetic data: classification-based results
From: MCOIN: a novel heuristic for determining transcription factor binding site motif width
Conservation | Known width (w∗) | MCOIN (w∗ ± 4) | E-values (w∗ ± 4) | ||||||
|---|---|---|---|---|---|---|---|---|---|
(mean bits/col) | sSn | sPPV | AUC | sSn | sPPV | AUC | sSn | sPPV | AUC |
2.00 | 0.84 | 0.25 | 0.99 | 0.93 | 0.42 | 1.00 | 0.91 | 0.79 | 0.99 |
1.49 | 0.26 | 0.07 | 0.98 | 0.28 | 0.15 | 0.99 | 0.21 | 0.45 | 0.98 |
1.08 | 0.02 | 0.01 | 0.96 | 0.01 | 0.01 | 0.96 | 0.01 | 0.23 | 0.96 |
0.76 | 0.00 | 0.00 | 0.94 | 0.00 | 0.00 | 0.93 | 0.00 | 0.12 | 0.94 |
0.51 | 0.00 | 0.00 | 0.93 | 0.00 | 0.00 | 0.93 | 0.00 | 0.09 | 0.93 |