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Table 7 E. coli data: classification-based results

From: MCOIN: a novel heuristic for determining transcription factor binding site motif width

Conservation Known width (w) MCOIN (w ± 4) E-values (wx ± 4)
(mean bits/col) sSn sPPV AUC sSn sPPV AUC sSn sPPV AUC
‘high’ (1.36) 0.81 0.22 0.96 0.72 0.29 0.96 0.70 0.17 0.95
‘low’ (0.78) 0.63 0.41 0.96 0.69 0.51 0.98 0.66 0.32 0.97
overall (1.13) 0.74 0.30 0.96 0.71 0.38 0.96 0.68 0.23 0.96
  1. Mean site-level sensitivity (sSn), positive predictive value (sPPV) and area under the ROC curve (AUC) for 20 datasets created using realE. coli data.