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Table 2 Effect of increasing coverage

From: Estimating population size via line graph reconstruction

# Genotypes Coverage # edges # edges Estimated # True # Compute
    removed haplotypes haplotypes time (s)
25 0.5 17 0 37 37 0.00
50 1 46 1 64 63 0.04
75 1.5 98 0 82 82 0.04
100 2 186 0 87 88 0.02
125 2.5 301 0 92 92 0.09
  1. Performance evaluation with respect to a sample drawn from an initial population of 100 haplotypes. The number of individuals drawn from the sample is varied.