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Table 3 Four‐fold cross‐validation

From: Probabilistic grammatical model for helix‐helix contact site classification

Trained for

Using property

 

Accessibility

vdW volume

c1

0.55 (0.58)

0.41 (0.46)

c2

0.46 (0.50)

0.68 (0.69)

c3

0.50 (0.55)

0.61 (0.71)

c4

0.57 (0.71)

0.44 (0.55)

  1. Average AUC ROC of combined grammars in 4‐fold CV of helix‐helix contact fragments classification in WDG150NR. Average AUC ROC of the best single grammars out of 3 trained grammars for each class‐property case is shown in parentheses. Bold fonts indicate the best performance for a given helix contact site class.
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Algorithms for Molecular Biology

ISSN: 1748-7188