Table 4 Summary of experimental results for the microarrays in Table 3
From: Configurable pattern-based evolutionary biclustering of gene expression data
Dataset | Algorithm | NumBic | Genes | Conditions | VEt | Mean gene variance | |
|---|---|---|---|---|---|---|---|
OPSM | 14 | 496.1 ± 791.1 | 8.6 ± 4.4 | 0.189 ± 0.051 | 1.39×105 ± 2.23×105 | ||
ISA | 0 | - | - | - | - | ||
Yeast 2884x17 | CC | 100 | 34.0 ± 64.2 | 7.6 ± 3.2 | 0.151 ± 0.048 | 3.20×103 ± 3.16×103 | |
Bimax | 56 | 2297.6 ± 26.1 | 15.3 ± 0.5 | 0.207 ± 0.004 | 1.42×105 ± 5.41×103 | ||
Evo-Bexpa | 100 | 44.0 ± 33.7 | 11.8 ± 3.9 | 0.051 ± 0.027 | 9.81×102 ± 5.00×102 | ||
OPSM | 12 | 1151.5 ± 1809.1 | 7.8 ± 4.1 | 0.155 ± 0.072 | 2.51×108 ± 4.22×108 | ||
ISA | 20 | 377.0 ± 191.0 | 2.7 ± 0.8 | 0.145 ± 0.053 | 5.98×108 ± 3.85×108 | ||
ET 7129x60 | xMotifs | 1000 | 2134.6 ± 830.4 | 5.0 ± 0.0 | 0.135 ± 0.021 | 9.61×107 ± 3.74×107 | |
CC | 100 | 53.1 ± 100.4 | 11.9 ± 7.9 | 0.310 ± 0.082 | 6.14×104 ± 2.06×105 | ||
Evo-Bexpa | 100 | 22.5 ± 6.8 | 50.8 ± 5.7 | 0.011 ± 0.003 | 1.78×107 ± 1.59×107 | ||
OPSM | 12 | 924.3 ± 1633.3 | 7.8 ± 4.3 | 0.103 ± 0.047 | 1.75×108 ± 2.89×108 | ||
Leukemia 7129x72 | ISA | 34 | 253.1 ± 172.1 | 3.1 ± 1.1 | 0.147 ± 0.049 | 3.31×108 ± 2.17×108 | |
CC | 100 | 53.5 ± 232.4 | 13.9 ± 8.6 | 0.265 ± 0.067 | 4.32×104 ± 8.53×104 | ||
Evo-Bexpa | 100 | 18.4 ± 2.9 | 63.3 ± 5.9 | 0.008 ± 0.002 | 4.46×106 ± 2.97×106 | ||
OPSM | 27 | 1170.6 ± 3274.1 | 16.2 ± 8.8 | 0.399 ± 0.163 | 1.73×107 ± 5.55×107 | ||
Steminal 26127x30 | ISA | 0 | - | - | - | - | |
CC | 100 | 179.1 ± 813.6 | 13.0 ± 3.1 | 0.219 ± 0.071 | 4.84×104 ± 1.19×105 | ||
Evo-Bexpa | 100 | 33.8 ± 17.9 | 26.3 ± 2.4 | 0.009 ± 0.004 | 4.80×105 ± 2.69×105 |