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Table 5 Validation results with GO hierarchy level limitations

From: Configurable pattern-based evolutionary biclustering of gene expression data

  All levels Levels 3 to 6 Levels 4 to 7
  p-value # Bics #Terms ¯ # Bics #Terms ¯ # Bics #Terms ¯
Yeast 0.01 32 5.969 32 5.125 31 4.387
  0.05 41 6.878 40 5.625 40 5.225
ET 0.01 3 3.000 3 3.000 3 2.666
  0.05 9 3.778 9 3.444 9 3.333
Leukemia 0.01 4 1.000 3 1.000 3 1.000
  0.05 12 2.333 11 1.454 11 1.818
Steminal 0.01 18 4.056 16 2.750 13 2.231
  0.05 27 7.111 26 5.269 25 4.200
  1. Validation with Gene Ontology has been carried out for Evo-Bexpa biclusters of the four datasets in Table 3 using the default configuration. This table shows the number of significant biclusters and significant terms in three different validations: taking the whole hierarchical graph into account, and limiting the validation with the levels 3 to 6 and 4 to 7, both inclusive.