Figure 8
From: MSARC: Multiple sequence alignment by residue clustering
Guide trees (ac) and alignment visualizations (bd) for test case BB40037 and programs Probalign (ab) and MSAProbs (cd). Tree branches and aligned sequences are colored based on the evolutionary distances to their neighbors, as computed from the guide-trees used during alignment. Sequences in alignments are ordered following their order in trees, so related sequences have similar color and are positioned together.