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Table 1 The results of joint secondary structure prediction of GRNAs in MCC in comparison to the PETcofold and other joint structure prediction methods such as RNAcofold, inteRNA, Pairfold and RactIP

From: RNA-RNA interaction prediction using genetic algorithm

RNA-RNA pairs

GRNAs

PETcofold

RNAcofold

inteRNA

Pairfold

RactIP

MicA-ompA

67

87

80

49

86

57

OxyS-fhlA

60

80

61

64

61

48

RyhB-uof-fur

56

13

21

12

21

19

RyhB-sodB

74

67

65

70

65

65

Average

64

62

57

49

58

47