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Table 1 The results of joint secondary structure prediction of GRNAs in MCC in comparison to the PETcofold and other joint structure prediction methods such as RNAcofold, inteRNA, Pairfold and RactIP

From: RNA-RNA interaction prediction using genetic algorithm

RNA-RNA pairs GRNAs PETcofold RNAcofold inteRNA Pairfold RactIP
MicA-ompA 67 87 80 49 86 57
OxyS-fhlA 60 80 61 64 61 48
RyhB-uof-fur 56 13 21 12 21 19
RyhB-sodB 74 67 65 70 65 65
Average 64 62 57 49 58 47