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Table 1 Comparison of algorithm performance on real data

From: Segmentor3IsBack: an R package for the fast and exact segmentation of Seq-data

Algorithm

Number of

Hellinger

False

 

segments

score

positives

PDPA- negative binomial

125

0.0120

39

PDPA- Poisson

106

0.0187

77

PELT

3416

0.0188

3003

Binary Segmentation

2408

0.0151

2072

  1. Overall Hellinger score of each of the segmentation algorithms, and number of estimated change-points falling within regions annotated as translated (thus considered as false positives).