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Table 1 Multi-location prediction results on the PROSITE-GO version of the dataset, averaged over 25 runs of 5-fold cross-validation, for multi-localized proteins only, using our system, YLoc+[[26]], Euk-mPLoc [[24]], WoLF PSORT [[23]], and KnowPred site [[36]]

From: Protein (multi-)location prediction: using location inter-dependencies in a probabilistic framework

 

Our system

YLoc+

Euk-mPLoc

WoLF

KnowPredsite

  

[[26]]

[[24]]

PSORT [[23]]

[[36]]

F 1 - label

0.66 (± 0.02)

0.68

0.44

0.53

0.66

Acc

0.63 (± 0.01)

0.64

0.41

0.43

0.63

  1. The F1-label score and Acc measures shown for all the systems except for ours are taken directly from Table Three in the paper by Briesemeister et al. [26]. Standard deviations are provided for our system (not available for others).
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Algorithms for Molecular Biology

ISSN: 1748-7188