From: Clustering of reads with alignment-free measures and quality values
 | read length = 300 |  | read length = 400 | ||||||
---|---|---|---|---|---|---|---|---|---|
 | (a) |  | (b) | ||||||
Distance | No errors | 3 % | 5 % | 10 % | Â | No Errors | 3 % | 5 % | 10 % |
 | 4 clusters |  | 4 clusters | ||||||
\(D^{*}_{2}\) | 0,680 | 0,667 | 0,658 | 0,625 | Â | 0,713 | 0,700 | 0,697 | 0,672 |
\(D^{*q}_{2}\) AQP | 0,680 | 0,672 | 0,673 | 0,650 | Â | 0,713 | 0,712 | 0,710 | 0,693 |
\(D^{*q}_{2}\) AQP q-red | 0,680 | 0,671 | 0,673 | 0,650 | Â | 0,713 | 0,711 | 0,711 | 0,694 |
\(D^{*q}_{2}\) AWP | 0,616 | 0,610 | 0,608 | 0,601 | Â | 0,643 | 0,636 | 0,632 | 0,623 |
\(D^{*q}_{2}\) AWP q-red | 0,616 | 0,610 | 0,607 | 0,602 | Â | 0,643 | 0,635 | 0,631 | 0,622 |
L 2 | 0,610 | 0,600 | 0,602 | 0,581 | Â | 0,638 | 0,630 | 0,624 | 0,614 |
KL | 0,617 | 0,604 | 0,601 | 0,577 | Â | 0,649 | 0,632 | 0,628 | 0,618 |
Symm, KL | 0,613 | 0,603 | 0,599 | 0,576 | Â | 0,647 | 0,632 | 0,627 | 0,616 |
D 2 | 0,601 | 0,593 | 0,588 | 0,575 | Â | 0,626 | 0,618 | 0,615 | 0,604 |