Table 7 Metagenomic reads classification of Helicobacter pylori ( SRR023794 ), Zymomonas mobilis ( SRR017901 ), E.coli ( FXAWNEV04 ) and Legionella pneumophila ( ERR164429 )
From: Clustering of reads with alignment-free measures and quality values
Distance | 4 cluster | 3 cluster |
|---|---|---|
\(D^{*}_{2}\) | 0.79782297 | 0.79129356 |
\(D^{*q}_{2}\) AQP q-red | 0.79775189 | 0.76920676 |
\(D^{*q}_{2}\) AWP q-red | 0.80050234 | 0.82603989 |
L 2 | 0.64335292 | 0.73455525 |
KL | 0.78663484 | 0.80525234 |
Simm, KL | 0.77196713 | 0.79216786 |
D 2 | 0.73917085 | 0.77062424 |