Skip to main content

Table 2 Simulated datasets of short reads

From: A two-phase binning algorithm using l-mer frequency on groups of non-overlapping reads

Samples No. of Phylogenetic Ratio No. of
species distance reads
S1 2 Species 1:1 96367
S2 2 Species 1:1 195339
S3 2 Order 1:1 338725
S4 2 Phylum 1:1 375302
S5 3 Species and 1:1:1 325400
   Family   
S6 3 Phylum and 3:2:1 713388
   Kingdom   
S7 5 Order, Order 1:1:1:4:4 1653550
   Genus, Order   
S8 5 Genus, Order 3:5:7:9:11 456224
   Order, Order   
S9 15 various distances 1:1:1:1:1: 2234168
    2:2:2:2:2:  
    3:3:3:3:3  
S10 30 various distances 4:4:4:4:4: 4990632
    6:6:6:6:6:  
    7:7:7:7:7:  
    8:8:8:8:8:  
    9:9:9:9:9:  
    10:10:10:10:10  
L1 2 Class 1:1 176688
L2 2 Class 1:2 259568
L3 2 Class 1:3 342448
L4 2 Class 1:4 425328
L5 2 Class 1:5 508209
L6 2 Class 1:6 591089