Table 2 The four neighborhood sizes that we vary within each aligner
Neighborhood size | Graphlet size (used by MI-GRAAL’s NCF) | \({\bf k}\)-hop neighborhood (used by GHOST’s NCF) |
|---|---|---|
T1 | 2-node graphlets | 1-hop neighborhood |
T2 | 2–3-node graphlets | 2-hop neighborhood |
T3 | 2–4-node graphlets | 3-hop neighborhood |
T4 | 2–5-node graphlets | 4-hop neighborhood |