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Fig. 2 | Algorithms for Molecular Biology

Fig. 2

From: Interpretation and approximation tools for big, dense Markov chain transition matrices in population genetics

Fig. 2

Network display of transition matrices for \(N=20, \mu =10^{-6}, c=0.0\). a. De Finetti diagram showing symmetry (dashed blue axis, red arrows corresponding to identical probabilities) and \(F_{IS}\) isocurves (gray and black). b \(p_{stay}\) (node color), probability to stay at each node for one time step. c Most probable path connecting (N,0,0) to (0,0,N). d Most probable neighbors (directed edges) and in-degree (node color), i.e. for each node the most likely outbound transition at the next time step and the number of inbound most likely transitions from other states. Enlarged version in Additional file 2

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