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Fig. 2 | Algorithms for Molecular Biology

Fig. 2

From: HIA: a genome mapper using hybrid index-based sequence alignment

Fig. 2

Classification diagram of split causes between matched region and unmatched region. Panel a represents the split causes of LMUR. Panel b shows the split cuases of RMUR. There are four split causes (Mismatch, Insertion, Deletion, and Mixed) in LMUR and RMUR. Panel c represents the split causes of MRUR, that can be classified in great detail. Yellow block indicates that both blocks of read and sequence are exactly matched. Dark gray block means the mismatch region. White block shows that two blocks are gapped. Red block shows that two blocks are overlapped. Finally, blue block indicates that there are two more split causes on read block and sequence block

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