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Table 1 Summary of sequence data analyzed

From: Estimation of genetic diversity in viral populations from next generation sequencing data with extremely deep coverage

Sequenced data Reads Nucl. Mapped (%) Time (hour)
HIV1—non-stimulated CD4/R5 1.11 × 107 5.53 × 108 91.81 34.88
HIV2—stimulated CD4/R5 1.04 × 107 5.19 × 108 90.84 34.18
HIV3—non-stimulated CD4/X4 1.10 × 107 5.50 × 108 91.22 29.05
HIV4—stimulated PBMC/X4 9.41 × 106 4.71 × 108 91.14 13.63
HIV5—stimulated PBMC/R5 1.14 × 107 5.73 × 108 90.49 24.09
HIV6—non-stimulated PBMC/X4 1.12 × 107 5.62 × 108 91.42 27.54
HIV7—non-stimulated PBMC/R5 1.19 × 107 5.94 × 108 93.27 15.34
HIV8—control (pNL4-3kfs) 1.01 × 107 5.05 × 108 93.10 30.14
Total 8.65 × 107 4.33 × 109 91.67 208.85
  1. The first column lists all the experimental conditions and the control experiment that where sequenced, the second column (Reads) displays the number of reads sequenced in each condition, the third column (Nucl.) displays the number of nucleotides in each condition, the fourth column (Mapped) displays the percentage of reads that have been mapped and the fifth column (Time) displays the time elapsed in each mapping procedure