Table 1 Average time (in seconds) for the comparison of two sequences on several datasets with the “relaxed” version of MissMax
From: MissMax: alignment-free sequence comparison with mismatches through filtering and heuristics
k | Rodents | Carnivora | Mixed | Random |
|---|---|---|---|---|
5 | 2.11 | 2.22 | 2.15 | 1.85 |
10 | 2.45 | 2.56 | 2.47 | 2.18 |
20 | 3.07 | 3.17 | 3.09 | 2.72 |
50 | 4.74 | 4.87 | 4.82 | 4.28 |
100 | 7.42 | 7.62 | 7.57 | 6.65 |