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Table 3 Average percentage of pair of positions considered in several datasets with the relaxed filter, with respect to the quadratic maximum number of pairs

From: MissMax: alignment-free sequence comparison with mismatches through filtering and heuristics

Relaxed MissMax

k = 5

k = 10

k = 20

k = 50

k = 100

Rodents

7.26

8.37

9.15

9.74

9.93

Mixed

7.16

8.15

8.76

9.28

9.79

Random

9.73

13.31

15.17

15.29

15.27

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Algorithms for Molecular Biology

ISSN: 1748-7188