Table 2 Biological networks used to assess the relevance and efficiency of BicNET
From: BicNET: Flexible module discovery in large-scale biological networks using biclustering
Type | Organism | \(\sharp\)Nodes | \(\sharp\)Interactions | Density (%) | Notes |
|---|---|---|---|---|---|
GI | Yeast | 4455 | 1,91,309 | 1.0 | Links (65Â % negative) from double-mutant arrays [19] |
GI | Yeast | 6314 | 4,23,335 | 1.1 | Known and predicted associations benchmarked from multiple data sources and text mining, and combined through an integrative score [16] |
PPI | E. Coli | 8428 | 32,93,416 | 4.6 | |
PPI | Human | 19,247 | 85,48,002 | 2.3 |