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Table 7 Sets of modules with meaningful overlapping areas (satisfying the in-between plaid assumption [21])

From: BicNET: Flexible module discovery in large-scale biological networks using biclustering

ID Modules with meaningful overlapping regions Pattern \(\sharp\)Nodes \(|I|\times |J|\) % Overlapping interactions
G6 G7 from Table 6 (orders preserved in overlapping regions before cumulative effect) Order 42 × 8 21
G8: tRNA re-export from nucleus; nuclear mRNA surveillance of mRNP export Constant 12 × 10 62
G9: More general module (background) including cellular responses to pH Constant 41 × 6 16
S4 S2 from Table 6 (satisfying the relaxed additive model proposed in [21]) Constant 80 × 18 42
S7: Telomere maintenance; translocation; protein import into nucleous Constant 104 × 20 37
S8: Response to ionizing radiation; ribose phosphate metabolic process Constant 59 × 31 45
S9: Positive regulation of mitochondrial translation in response to stress Constant 50 × 20 89