Jabba: hybrid error correction for long sequencing reads

Table 1 The data sets and reference genomes

	ID	Number of reads	Number of bases (Mbp)	Maximal read length	N50	Estimated coverage
Escherichia coli
Reference	NC_000913^a
Short reads	ART	28.4 M	2840	100	100	600×
Long reads	SRR1284073^b	163 K	649	49,424	13,578	135×
Aeromonas hydrophila
Reference	NC_008570^a
Short reads	ART	4.74 M	474	100	100	100×
Long reads	pbsim	515	4.74	24,430	10,421	1×
Saccharomyces cerevisiae
Reference	NC_001133^a
Short reads	ART	9.72 M	2430	250	250	200×
Long reads	SRR1284074^b	1.96 M	5580	37,008	3973	453×
	SRR1284662^b
Ostreococcus tauri
Reference	NC_014426^a
Short reads	[30]	9.72 M	1778	76	76	135×
Long reads	[30]	225 K	1135	22,892	7322	86×
Arabidopsis thaliana
Reference	NC_003070^a
Short reads	ART	23.9 M	5975	250	250	49×
Long reads	SRR1284093^b	327 K	1439	86,350	14,256	12×
	SRR1284094^b
Drosophila melanogaster
Reference	Release 5^c
Short reads	ART	24.1 M	6025	250	250	49×
Long reads	SRR1204085^b	327 K	686	55,988	12,478	6×
	SRR1204086^b

ISSN: 1748-7188