Table 3 Average CPU time per read for LoRDEC, proovread and Jabba
From: Jabba: hybrid error correction for long sequencing reads
| Â | LoRDEC (ms) | proovread (ms) | Jabba (ms) |
|---|---|---|---|
E. coli: 4.7 Mbp | 111 | 1782 | 47 |
A. hydrophila: 4.8 Mbp | 582 | 5652 | 11 |
S. cerevisiae: 12.3 Mbp | 172 | – | 28 |
O. tauri: 13.2 Mbp | 462 | 3165 | 9 |
A. thaliana: 121 Mbp | 633 | 2128 | 100 |
D. melanogaster: 122 Mbp | 289 | 1699 | 53 |