From: Circular sequence comparison: algorithms and applications
(a) \(G_q(x_1)\) | |
 \(\texttt {AAA}\) | 0 |
 \(\texttt {AGC}\) | 0 |
 \(\texttt {AGT}\) | 0 |
 \(\texttt {CCC}\) | 0 |
 \(\texttt {CTA}\) | 0 |
 \(\texttt {GAG}\) | 1 |
 \(\texttt {GCG}\) | 0 |
 \(\texttt {GGA}\) | 1 |
 \(\texttt {GGG}\) | 0 |
 \(\texttt {GTC}\) | 0 |
 \(\texttt {TAG}\) | 0 |
 \(\texttt {TCT}\) | 0 |
 \(\texttt {TTC}\) | 0 |
 \(\texttt {TTT}\) | 0 |
(b) \(G_q(y_1)\) | |
 \(\texttt {AAA}\) | 0 |
 \(\texttt {AGC}\) | 0 |
 \(\texttt {AGT}\) | 0 |
 \(\texttt {CCC}\) | 0 |
 \(\texttt {CTA}\) | 0 |
 \(\texttt {GAG}\) | 0 |
 \(\texttt {GCG}\) | 0 |
 \(\texttt {GGA}\) | 0 |
 \(\texttt {GGG}\) | 0 |
 \(\texttt {GTC}\) | 0 |
 \(\texttt {TAG}\) | 0 |
 \(\texttt {TCT}\) | 1 |
 \(\texttt {TTC}\) | 1 |
 \(\texttt {TTT}\) | 0 |
(c) \(D_{q}(x_1, y_1)\) | |
 \(\texttt {AAA}\) | 0 |
 \(\texttt {AGC}\) | 0 |
 \(\texttt {AGT}\) | 0 |
 \(\texttt {CCC}\) | 0 |
  \(\texttt {CTA}\) | 0 |
 \(\texttt {GAG}\) | 1 |
 \(\texttt {GCG}\) | 0 |
 \(\texttt {GGA}\) | 1 |
 \(\texttt {GGG}\) | 0 |
 \(\texttt {GTC}\) | 0 |
 \(\texttt {TAG}\) | 0 |
 \(\texttt {TCT}\) | 1 |
 \(\texttt {TTC}\) | 1 |
 \(\texttt {TTT}\) | 0 |
(d) \(G_q(x_2)\) | |
 \(\texttt {AAA}\) | 0 |
 \(\texttt {AGC}\) | 0 |
 \(\texttt {AGT}\) | 0 |
 \(\texttt {CCC}\) | 0 |
 \(\texttt {CTA}\) | 1 |
 \(\texttt {GAG}\) | 0 |
 \(\texttt {GCG}\) | 0 |
 \(\texttt {GGA}\) | 0 |
 \(\texttt {GGG}\) | 0 |
 \(\texttt {GTC}\) | 0 |
 \(\texttt {TAG}\) | 0 |
 \(\texttt {TCT}\) | 1 |
 \(\texttt {TTC}\) | 0 |
 \(\texttt {TTT}\) | 0 |
(e) \(G_q(y_2)\) | |
 \(\texttt {AAA}\) | 0 |
 \(\texttt {AGC}\) | 1 |
 \(\texttt {AGT}\) | 0 |
 \(\texttt {CCC}\) | 0 |
 \(\texttt {CTA}\) | 0 |
 \(\texttt {GAG}\) | 0 |
 \(\texttt {GCG}\) | 1 |
 \(\texttt {GGA}\) | 0 |
 \(\texttt {GGG}\) | 0 |
 \(\texttt {GTC}\) | 0 |
 \(\texttt {TAG}\) | 0 |
 \(\texttt {TCT}\) | 0 |
 \(\texttt {TTC}\) | 0 |
 \(\texttt {TTT}\) | 0 |
(f) \(D_{q}(x_2, y_2)\) | |
 \(\texttt {AAA}\) | 0 |
 \(\texttt {AGC}\) | 1 |
 \(\texttt {AGT}\) | 0 |
 \(\texttt {CCC}\) | 0 |
 \(\texttt {CTA}\) | 1 |
 \(\texttt {GAG}\) | 0 |
 \(\texttt {GCG}\) | 1 |
 \(\texttt {GGA}\) | 0 |
 \(\texttt {GGG}\) | 0 |
 \(\texttt {GTC}\) | 0 |
 \(\texttt {TAG}\) | 0 |
 \(\texttt {TCT}\) | 1 |
 \(\texttt {TTC}\) | 0 |
 \(\texttt {TTT}\) | 0 |