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Table 3 RF distances between the tree obtained from the NW(o) and those obtained from NW(r), cNW, hSW, and saCSCr

From: Circular sequence comparison: algorithms and applications

Dataset \(<\alpha ,\gamma ,\theta ,\kappa ,\omega>\) NW(r) cNW hSW saCSCr
<12, 2500, 0.05, 0.06, 0.04> 16 0 0 0
<12, 2500, 0.20, 0.06, 0.04> 12 0 0 0
<12, 2500, 0.35, 0.06, 0.04> 4 0 0 0
<25, 2500, 0.05, 0.06, 0.04> 44 0 0 0
<25, 2500, 0.20, 0.06, 0.04> 24 0 0 0
<25, 2500, 0.35, 0.06, 0.04> 16 0 0 0
<50, 2500, 0.05, 0.06, 0.04> 86 0 6 0
<50, 2500, 0.20, 0.06, 0.04> 84 0 0 0
<50, 2500, 0.35, 0.06, 0.04> 56 0 0 0
  1. The number of sequences in the dataset is denoted by \(\alpha\); \(\gamma\) denotes their lengths; \(\theta\) denotes the substitution rate; \(\kappa\) and \(\omega\) denote the relative insertion and deletion rates, respectively