Skip to main content

Table 2 Comparison between PSSM and LS

From: An effective sequence-alignment-free superpositioning of pairwise or multiple structures with missing data

Structure name

Time (s)

RMSD (Ã…)

id1(size)–id2(size)

LS

PSSM

LS

LS

d1cih (108)–d1lfma (103)

0.002 

 0.331

0.6

0.6

d1cih (108)–d2pcbb (104)

0.007

9.418

0.7

0.7

d1cih (108)–d1m60a (104)

0.006 

21.484

1.2

1.2

d2pcbb (104)–d1m60a (104)

0.007

7.394

1.3

1.3

d1cih (108)–d1kyow (108)

0.002

3.768

0.7

0.7

Back to article page

Algorithms for Molecular Biology

ISSN: 1748-7188