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Table 6 The RMSD of pairwise superposition between d1cih and others with PSSM for cytochrome C

From: An effective sequence-alignment-free superpositioning of pairwise or multiple structures with missing data

PDB-id1 (size)–PDB-id2 (size)

Time (s)

RMSD (Ã…)

d1cih (835)–d1crj (847)

 2.301

0.3829

d1cih (835)–d1csu (846)

 2.685

0.3881

d1cih (835)–d1csx (846)

 2.674

0.4852

d1cih (835)–d1yeb (847)

 3.108

0.7979

d1cih (835)–d1kyow (850)

48.480

0.9363

d1cih (835)–d1lfma (800)

 6.399

1.0420

d1cih (835)–d2pcbb (823)

424.890

1.1760

d1cih (835)–d1u74d (847)

1196.996

0.8338

d1cih (835)–d1m60a (819)

754.727

1.4786

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Algorithms for Molecular Biology

ISSN: 1748-7188