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Table 7 The RMSD of pairwise superposition between 2pka and others with PSSM for serine proteinases data set

From: An effective sequence-alignment-free superpositioning of pairwise or multiple structures with missing data

PDB-id1 (size)–PDB-id2 (size) Time (s) RMSD (Å)
2pka (232)–3est (240) 397.0237 1.5222
2pka (232)–1ton (227) 300.4844 1.3310
2pka (232)–3rp2 (224) 460.3419 1.5825
2pka (232)–4ptp (223) 236.3811 1.1994
2pka (232)–5cha (236) 454.4466 1.7583
2pka (232)–1ppb (295) 542.5367 2.9835