Skip to main content

Table 7 The RMSD of pairwise superposition between 2pka and others with PSSM for serine proteinases data set

From: An effective sequence-alignment-free superpositioning of pairwise or multiple structures with missing data

PDB-id1 (size)–PDB-id2 (size)

Time (s)

RMSD (Ã…)

2pka (232)–3est (240)

397.0237

1.5222

2pka (232)–1ton (227)

300.4844

1.3310

2pka (232)–3rp2 (224)

460.3419

1.5825

2pka (232)–4ptp (223)

236.3811

1.1994

2pka (232)–5cha (236)

454.4466

1.7583

2pka (232)–1ppb (295)

542.5367

2.9835

Back to article page

Algorithms for Molecular Biology

ISSN: 1748-7188