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Table 7 Length of the longest string corresponding to a node

From: A representation of a compressed de Bruijn graph for pan-genome analysis that enables search

k

62 E. coli

7 x Chr1

7 x HG

50

79,967

41,571

36,579

100

173,366

85,773

203,398

500

179,671

2,283,980

1,402,896

  1. The first column specifies the k-mer size and the remaining columns show the length of the longest string corresponding to a node in the compressed de Bruijn graph
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Algorithms for Molecular Biology

ISSN: 1748-7188