Table 1 Comparison on the real datasets for RSMT on breast cancer samples. (EXACTtree results are not available due to the time limitation)
From: Analysis of gene copy number changes in tumor phylogenetics
Case # | RSMT tree weight (# Steiner nodes) | ||
|---|---|---|---|
FISHtree | MSTtree | MPTtree | |
B1 IDC | 213 (15) | 212 (13) | 211 (19) |
B1 DCIS | 241 (14) | 242 (15) | 239 (22) |
B2 IDC | 217 (15) | 216 (20) | 211 (22) |
B2 DCIS | 56 (2) | 56 (2) | 55 (3) |
B3 DCIS | 100 (7) | 98 (7) | 98 (10) |
B4 IDC | 214 (16) | 213 (17) | 213 (17) |
B6 IDC | 112 (4) | 111 (4) | 111 (6) |
B7 IDC | 116 (8) | 113 (12) | 113 (12) |
B7 DCIS | 186 (13) | 184 (14) | 182 (22) |
B9 IDC | 222 (22) | 217 (25) | 213 (30) |
B9 DCIS | 164 (12) | 163 (13) | 161 (15) |
B10 IDC | 128 (4) | 128 (4) | 127 (4) |
B10 DCIS | 146 (6) | 145 (8) | 145 (9) |
B11 DCIS | 136 (6) | 135 (7) | 134 (7) |
B12 IDC | 201 (9) | 200 (10) | 198 (15) |
B12 DCIS | 161 (9) | 161 (10) | 158 (13) |
B13 IDC | 132 (7) | 131 (8) | 131 (8) |
B13 DCIS | 63 (3) | 62 (4) | 62 (4) |