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Table 3 Computational time (in seconds) required in comparing two protein structures using different methods

From: An efficient algorithm for protein structure comparison using elastic shape analysis

Method ~100 residues ~200 residues ~300 residues
Matt 1.300 3.000 5.100
MUSTANG 0.160 2.300 2.100
ESA 1.200 2.600 15.000
Proposed method (ESA-MC-BB) 0.740 1.040 1.540
Proposed method (ESA-CA) 0.556 0.745 1.466