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Fig. 5 | Algorithms for Molecular Biology

Fig. 5

From: Best hits of 11110110111: model-free selection and parameter-free sensitivity calculation of spaced seeds

Fig. 5

Bernoulli and Dirac optimal seeds. The Bernoulli and Dirac optimal seeds, for single seeds of weight 11 and span \(\le 22\), over the match probability or the match frequency of each model (x-axis), and on any alignment length \(\ell \in [22\ldots64]\) (y-axis). On both Figs. 5 and 6, we choose to represent the same seeds with the same label and with the same background color. On discrete models, a pink mark is set. Seeds on the right of this mark are lossless for the two parameters indicated on the right margin: the minimum number of matches m over the alignment length \(\ell\)

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