Table 1 Test systems
From: Gerbil: a fast and memory-efficient k-mer counter with GPU-support
System one | System two | |
|---|---|---|
CPU | Intel Core-i5 2550k | Intel Xeon(R) E3-1231v3 |
Threads | 4 | 8 |
RAM | 16 GB DDR3 | 32 GB DDR3 |
GPU | GeForce GTX 970 | GeForce GTX TITAN X |
Working-disk | 256 GB Crucial M550 | 2x Samsung 850 EVO 500 GB (RAID-0) |
OS | Ubuntu 16.04 LTS | Ubuntu 16.04 LTS |
In/out-disk | Transcend StoreJet 35T3 USB 3.0 (External HDD) | Transcend StoreJet 35T3 USB 3.0 (External HDD) |