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Fig. 4 | Algorithms for Molecular Biology

Fig. 4

From: The feasibility of genome-scale biological network inference using Graphics Processing Units

Fig. 4

Description of subnetwork for gene #4. Subnetwork topology (a) and mRNA expression profiles (b) for target gene #4 from the 10-gene network analyzed by Bazil et al. [4]. In a, solid black lines represent edges recovered by the algorithm, which are present in the true network and dashed gray line represents edge not recovered by the algorithm, but which is present in the true network. In b, the mRNA expression profile described by the regulator genes determined by the algorithm is presented for the target gene 4. The profiles for the regulator genes are presented as cubic splines using mRNA expression data. The number against each profile represents the gene index

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