Fig. 3From: StreAM-\(T_g\): algorithms for analyzing coarse grained RNA dynamics based on Markov models of connectivity-graphsStructural representation of TC-Aptamer. a Crystal structure of TC-Aptamer with a cut-off of 13 Å and using \(C3'\) atom for coarse graining reveals edges for dominant WC base-pairings. Important structural parts are annotated according to [23]. b Secondary structure representation of TC-Aptamer. Nucleotides are displayed as vertices and connections are based on hydrogen-bonding patterns. Nucleotides participating in TC-binding are colored in red. Graphics were created using Pymol and R [39, 47]Back to article page