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Table 1 Details of the dynamic graphs obtained from MD simulation trajectories

From: StreAM-\(T_g\): algorithms for analyzing coarse grained RNA dynamics based on Markov models of connectivity-graphs

  \(\mathbf{10}\) Å \(\mathbf{11}\) Å \(\mathbf{12}\) Å \(\mathbf{13}\) Å \(\mathbf{14}\) Å \(\mathbf{15}\) Å Rand \(_{g1}\) Rand \(_{g2}\) Rand \(_{g3}\)
|V| 65 65 65 65 65 65 500 500 500
|E| 94 129 189 241 298 353 500 1000 1200
\(\delta _{avg}\) 6.1 15.6 19.4 18 19.6 23.8 80 100 120
  1. |V| is the number of vertices, |E| the number of edges and \(\delta _{t}\) is the average batch size of a simulation. We convert simulations to unit sphere dynamic graphs with \(d \in [10, 15]\) Å