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Table 2 Real datasets used in the experimental evaluation

From: Fast phylogenetic inference from typing data

Dataset Typing method Profile length Number of distinct elements References
Campylobacter jejuni wgMLST 5446 5669 (*)
Salmonella enterica wgMLST 3002 6861 [13]
Salmonella typhi SNP 22,143 1534 [36]
Streptococcus pneumoniae cgMLST 235 1968 [37,38,39]
  1. (*) Dataset provided by the Molecular Microbiology and Infection Unit, IMM