Skip to main content

Advertisement

Springer Nature is making SARS-CoV-2 and COVID-19 research free. View research | View latest news | Sign up for updates

Table 3 Comparison with different haplotype lengths (CELSIM instance)

From: A fast and accurate enumeration-based algorithm for haplotyping a triploid individual

n RR VE MEC Running time (s)
EH HC HT EH HC HT EH HC HT EH HC HT
100 0.97 0.90 0.89 4 29 26 85 194 117 0.01 0.03 0.01
200 0.96 0.89 0.90 12 61 57 136 305 169 0.04 0.16 0.04
300 0.95 0.89 0.88 29 92 90 181 387 230 0.11 0.20 0.09
500 0.93 0.88 0.87 57 156 148 271 573 337 0.56 0.83 0.72
800 0.92 0.88 0.86 100 256 242 398 855 492 2.21 2.59 2.30
1000 0.92 0.88 0.86 136 322 314 479 1029 595 4.36 4.67 4.51