Table 4 Comparison with different single fragment length ranges (CELSIM instance)
From: A fast and accurate enumeration-based algorithm for haplotyping a triploid individual
f min , f max | RR | VE | MEC | Running time (s) | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
EH | HC | HT | EH | HC | HT | EH | HC | HT | EH | HC | HT | |
[3, 7] | 0.97 | 0.90 | 0.89 | 4 | 29 | 26 | 85 | 194 | 117 | 0.01 | 0.03 | 0.01 |
[2, 4] | 0.95 | 0.89 | 0.88 | 8 | 30 | 28 | 67 | 129 | 90 | 0.01 | 0.03 | 0.01 |
[1, 2] | 0.94 | 0.90 | 0.88 | 14 | 30 | 28 | 65 | 86 | 76 | 0.02 | 0.03 | 0.01 |