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Table 1 Datasets used in our experiments

From: External memory BWT and LCP computation for sequence collections with applications

Name

Size GB

N. of strings

Max Len

Ave Len

Max LCP

Ave LCP

short

8.0

85,899,345

100

100

99

27.90

long

8.0

28,633,115

300

300

299

90.28

pacbio.1000

8.0

8,589,934

1000

1000

876

18.05

pacbio

8.0

942,248

71,561

9116

3084

18.32

  1. Columns 4 and 5 show the maximum and average lengths of the single strings. Columns 6 and 7 show the maximum and average LCPs of the collections