Skip to main content

Table 2 Normalized coherence scores of various marker subsets in human ES cells

From: Semi-nonparametric modeling of topological domain formation from epigenetic data

Allowed modifications (human ES to ES)

Coherence score

(Normalized)

28 histone modifications + Concave + Nonnegative

1.00

28 histone modifications + Concave

0.96

28 histone modifications

0.97

H3K4me3, H3K79me2, H3K27ac, H3K9me3, H3K36me3, H4K20me1

0.91

H3K36me3, H3K4me1, H3K4me3, H3K9me3 + Concave + Nonnegative

0.90

H3K36me3, H3K4me1, H3K4me3, H3K9me3 + Concave

0.88

H3K36me3, H3K4me1, H3K4me3, H3K9me3

0.91