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Table 1 Summary of read data used in the experiments

From: Kermit: linkage map guided long read assembly

Data set

Reads

Total bases

Coverage

Accession

S. cerevisiae (simulated)

36,639

486,048,334

39.98

Simulated

C. elegans (simulated)

296,230

3,930,689,562

39.99

Simulated

S. cerevisiae

52,208

690,899,144

56.83

PacBio \(\text {DevNet}\)a

C. elegans

740,776

8,118,404,281

82.59

PacBio \(\text {DevNet}\)b

H. erato

10,818,653

27,094,241,328

60.89

SRR3476970 SRR4039325

B. pendula

1,898,360

19,032,363,776

49.71

ERR2003767 ERR2003768

  1. a https://github.com/PacificBiosciences/DevNet/wiki/Saccharomyces-cerevisiae-W303-Assembly-Contigs
  2. b https://github.com/PacificBiosciences/DevNet/wiki/C.-elegans-data-set