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Table 4 Number of edges supported by the positions the reads were simulated from

From: Kermit: linkage map guided long read assembly

  Graph Genomic edges Spurious edges
S. cerevisiae Miniasm 76,538 (99.39%) 466 (0.60%)
Kermit 76,518 (99.93%) 52 (0.07%)
Miniasm cleaned 7146 (99.92%) 6 (0.08%)
Kermit cleaned 7114 (100.0%) 0 (0.0%)
C. elegans Miniasm 668,012 (99.80%) 1306 (0.19%)
Kermit 667,970 (99.99%) 58 (0.003%)
Miniasm cleaned 60,416 (99.95%) 28 (0.05%)
Kermit cleaned 60,356 (99.997%) 2 (0.003%)
  1. Graphs marked cleaned are also using the graph cleaning steps that are already implemented in Miniasm