Skip to main content

Advertisement

Table 7 Most common repair operation for the five networks

From: Repairing Boolean logical models from time-series data using Answer Set Programming

Arabidopsis C. elegans Budding Fission Mammalian
Repair % Repair % Repair % Repair % Repair %
reg(g7,g1) 100.00 rEdge(g2,g2) 100.00 rEdge(g11,g11) 100.00 rEdge(g1,g3) 93.33 rEdge(g4,g3) 100.00
reg(g9,g9) 61.90 reg(g6,g5) 68.75 rEdge(g4,g4) 100.00 rEdge(g6,g3) 86.67 rEdge(g4,g4) 100.00
reg(g4,g3) 57.14 rEdge(g4,g5) 62.50 rEdge(g7,g10) 100.00 rEdge(g7,g3) 86.67 rEdge(g9,g8) 100.00
reg(g10,g7) 57.14 reg(g3,g7) 62.50 rEdge(g7,g3) 100.00 rEdge(g9,g3) 83.33 rEdge(g2,g6) 98.08
reg(g7,g7) 52.38 rEdge(g5,g5) 56.25 rEdge(g7,g7) 100.00 rEdge(g9,g2) 73.33 rEdge(g2,g4) 96.15
rEdge(g2,g9) 47.62 reg(g7,g6) 56.25 rEdge(g8,g8) 100.00 rEdge(g4,g3) 70.00 rEdge(g1,g10) 94.23
reg(g6,g4) 47.62 rEdge(g5,g7) 50.00 rEdge(g1,g2) 97.30 rEdge(g6,g2) 70.00 rEdge(g5,g7) 94.23
reg(g7,g9) 47.62 funcAND(g2) 43.75 rEdge(g1,g5) 97.30    rEdge(g9,g7) 92.31
   funcAND(g5) 43.75 rEdge(g7,g9) 97.30     
  1. rEdge stands for removing an edge, reg changing the sign of regulator, funcAND/funcOR changing the function