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Table 2 Target identification: we randomly generate 1000 sequences of length n and Boltzmann sample \(2^{10}\) structures together with a target structure s for each sequence

From: On an enhancement of RNA probing data using information theory

 

\(n=100\)

\(n=200\)

\(n=300\)

\({\mathbb {P}}(s\in \Omega ^*)\)

\(0.768 \pm 0.178\)

\(0.742 \pm 0.192\)

\(0.751 \pm 0.187\)

\({\mathbb {P}}(s^*=s)\)

\(0.669 \pm 0.222\)

\(0.646\pm 0.229\)

\(0.706 \pm 0.208\)

\({\mathbb {P}}(s^*=s\mid s\in \Omega ^*)\)

\(0.871 \pm 0.288\)

\(0.871 \pm 0.309\)

\(0.940 \pm 0.277\)

  1. We compute the probabilities of identifying the target utilizing the ensemble tree. We display mean and standard deviation