Table 4 Assembly results for the Rmap dataset of the climbing perch genome
From: Fast and efficient Rmap assembly using the Bi-labelled de Bruijn graph
Assembler | Run time | Peak Memory | No. of contigs | Max | Mean | GF(%) | MA |
|---|---|---|---|---|---|---|---|
Solve | 156 d | 16 Gb | 907 | 1032 (8.4 Mbp) | 104 (7.9 Mbp) | 97.6 | 5 |
\({\textsc {rmapper}}\) | 7.5 h | 9.7 | 4573 | 217 (1.6 Mbp) | 32 (0.28 Mbp) | 92.07 | 0 |
\({\textsc {rmapper}}\)2.0 | 14.9 h | 18.8 | 4972 | 294 (2.4 Mbp) | 42 (0.4 Mbp) | 95.05 | 0 |